3D Molecules using the Jmol Applet


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HIGH SCHOOL CHEMISTRY

K-12 Mathematics and Molecules 3-D Laboratory Exercise

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Molecules of Taste

3d Molecules using Jmol

All 3D Structures are shown using Jmol

Pdb files are also available if you use Chime...

SEE ALSO PROTEIN STRUCTURES

Hydrocarbons

Benzene	Cyclohexane	Propane	Ethane
Ethanol	Formaldehyde	Octane	Decane
Heptane	Hexane	Pentane	Butane
Methane	Methanol	Acetone	ethylene
acetylene

Drugs

Acetaminophen	Epinephrine	Amantadine	Ambien
Amphetamine	Aspirin	AZT	Barbiturate
Benadryl	Bextra	Caffeine	Celebrex
Cipro	Cisplatin	Cocaine	LSD
Norepinephrine	Novacaine	Penicillin	Prozac
Diazepam	Ibuprofen	l-dopa	Methamphetamine
Morphine	Buprenorphine	Naloxone
Hydrocodone	Naltrexone	Oxycodone	MDMA
Codeine	Methadone	Naproxen	Nicotine
Ranitidine (Zantac)	Ritalin	Focalin	Streptomycin
Tylenol	Pseudoephedrine	Ephedrine
Taxol	THC	Tetracycline	Melatonin
Viagra	Vioxx	Rozerem	Lipitor
Zocor	Pravachol	Haldol	Thorazine
Zyprexa	Paliperidone	Asenapine	Aripiprazole
Aricept	Exelon	Razadyne	Memantine
Dimebolin	Curcumin	Abiraterone	Tretinoin
Sirolimus	Seroquel	Clozapine	Fluphenazine
Perphenazine	Iloperidone	Bifeprunox	Ziprasidone
Risperidone

Amino Acids

Alanine	Arginine	Asparagine	Aspartic Acid
Cysteine	Glutamic Acid	Glycine	Histidine
Isoleucine	Leucine	Lysine	Methionine
Phenylalanine	Proline	Serine	Tryptophan
Tyrosine	Valine

Fats and Fatty Acids

Arachidonic Acid	Cholesterol	Linoleic Acid	Myristic Acid
Oleic Acid	Omega-6	Phosphatidyl Choline	Omega-3
Stearic Acid	Trans Fatty Acids	Palmitic Acid	Linolenic Acid

Carbohydrates

Glucose

Fructose

Galactose

Sucrose

Mannose

Molecules of Color

Chloropyll	Astaxanthin	Beta Carotene	Astaxanthin
Lycopene	Curcumin	Zeaxanthin	Pheophytin

DNA and Energy Molecules

Adenine	Cytosine	Uracil	Guanine
DNA	AMP	ATP	GTP

Neurotransmitters

Dopamine	Serotonin	Acetylcholine	Norepinephrine
Epinephrine	Nitric Oxide	ATP	GTP
GABA	Melatonin

Materials

Cotton	Diamond	Graphite	Fullerene
Nanotube	Styrene	Plexiglass	Nylon
Teflon	Graphene

Antioxidants

Astaxanthin	Beta Carotene	Epicatechin	Ellagic Acid
Melatonin	Lutein	Lycopene	Proanthocyanidins
Resveratrol	Vitamin C	Vitamin E	Zeaxanthin
Coenzyme Q10

Molecules of Taste

Sucrose	Fructose	Glucose	Lactose
Saccharin	Aspartame	Sucralose	Denatonium
Caffeine	Quinine	PTC (Phenylthiourea)	Humulone (beer)
Gluconasturtin	MSG	Aspartate	Citric Acid
Tartaric Acid	Acetic Acid	Capsaicin	Menthol
Sodium Chloride

SEE ALSO: HOW TO VIEW MOLECULES USING 3D ANAGLYPH GLASSES

More Interactive Java Applets

BIOLOGY -- Cells Alive, Pairing DNA bases, axon potential simulator, Virtual Frog Dissection, Human Gait Analysis...

JUST MOLECULES -- Applets of Molecules... Molecular and Atomic Orbitals ...

BIOCHEMISTRY -- Lennard-Jones Molecular Dynamics, Peptide synthesis animation, chime molecular modeling tutorials...

MATHEMATICS -- Pythagorean Theorem, Probability Theorem, Pascal'sTriangle, Integration Applet, Vectors, Virtual Abacus ...

EARTH AND SPACE SCIENCE -- Sun, moon and earth, Azimuth and Elevation, Earth Interior, Impact Crater, Atomic Emission, Planetary Detection...

PHYSICS -- Mechanics, Levers, Pulleys, Inclined Planes, Pendulum, Light and Optics, Electricity and Magnetism...

Need a Browser or Plug-in to view Molecules

For Chime plug-in --->Chime Download from MDL

For additional pdb browsers see: Free 3D Molecular Modeling Software

More 3d Molecules

COMPLETE DATABASE OF 3D MOLECULES

WATER

ICE

METHANE

CARBON MONOXIDE

DIAMOND

FULLERENE

SALT

SOAP

PROTEIN STRUCTURES

DNA

---more 3D molecules

Do you have 3D viewing glasses?

With Anaglyph Glasses ---red-blue, red-cyan, or red green glasses.

How to view molecules in 3D

Is 3D the Wave of the Future in Entertainment?

See 3D in 2009

Questions or Comments?
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